visiumhd

Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

Code for paper "Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration"

Quick data visualization for: Single-cell spatial transcriptomic profiling of cultured cells and engineered tissues without embedding or sectioning

Code associated with the manuscript "A Single-Cell Bioprinting Approach with Subcellular Resolution to Reconstruct Native Cellular Microenvironments"

A R package for deconvolving low‐resolution Visium HD spatial data back to high‐resolution spots via barcode‐ and coordinate‐based methods, with built‐in visualization.