Clean up config files and unused test files

.flake8

@@ -40,7 +40,6 @@ extend-ignore =
 per-file-ignores =
     __init__.py: E402, F401
     dpnp/dpnp_algo/__init__.py: F401
-    dpnp/dpnp_algo/__init__.py: F401
     dpnp/fft/__init__.py: F401
     dpnp/linalg/__init__.py: F401
     dpnp/random/__init__.py: F401

.github/workflows/bump-sycl-deps.yml

@@ -25,7 +25,9 @@ jobs:
     timeout-minutes: 15
 
     permissions:
+      # Needed to push the branch with the updated pins
       contents: write
+      # Needed to open a pull request from that branch
       pull-requests: write
 
     env:

.pre-commit-config.yaml

@@ -20,7 +20,6 @@ repos:
     # Contents
     -   id: check-ast
     -   id: check-builtin-literals
-    -   id: check-case-conflict
     -   id: check-executables-have-shebangs
     -   id: check-merge-conflict
     -   id: check-shebang-scripts-are-executable

setup.py

@@ -64,6 +64,7 @@
             "tests/tensor/*.py",
             "tests/tensor/*/*.py",
             "tests/testing/*.py",
+            "tests/third_party/*.py",
             "tests/third_party/cupy/*.py",
             "tests/third_party/cupy/*/*.py",
             "tests/third_party/cupyx/*.py",