Bioinformatics library in Kotlin
Variational Auto Encoders for learning binding signatures of transcription factors
In this project we implement a DNA-Genetic Encryption Technique (D-GET) in order to make the DNA SEQUENCE more secure and less predictable.
A lightweight Python module to read and write FASTA sequence records
A DNA design and assembly method based on multi-objective optimization.
Algorithm Semester-long Project
Recode a DNA sequence to match a target amino‑acid sequence with the minimal number of nucleotide changes, preserving the reading frame. Includes a CLI and Python API.
Scripts to analyse the sequence composition and bias of protein and nucleotide sequences.
Analyze a DNA sequence for primer construction
Moduating gene expression via in-silico mutagenesis
🧬 Zero-dependency Python CLI to translate RNA and DNA sequences into amino acid chains using the standard genetic code, with FASTA-ready output formats.
Offline bilingual DNA sequence inspector for Windows
DNAc is a programming language for DNAs.
DNA 序列分类的自监督表示学习 —— 掩码重构预训练 CNN 编码器 + 线性探测。含完整训练日志、PCA / t-SNE 可视化，以及一份把「分类头为什么停在随机水平」查到根上的复盘
⚗️ Zero-dependency Python CLI to generate DNA complements and reverse complements using standard base-pairing rules.
Bioinformatics ML project comparing DNA sequence encoding methods for classification.
Fine-tuning DNABERT-2 to classify normal vs tumour colorectal gene enhancers from DNA sequence alone (MSc thesis). PR-AUC 0.758 · arXiv:2509.25274
A comprehensive implementation of DNA sequence alignment algorithms using dynamic programming.
Beginner Python tool for finding common restriction enzyme recognition sites in the pBR322 plasmid sequence.
Convolutional autoencoder for lossy genomic sequence compression achieving 18.9× compression ratio vs GZIP's 3.2× while preserving 99.6% GC content. TensorFlow/Keras, BioPython.
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