Remove typedict

docs/docs/api-reference/index.md

@@ -13,7 +13,7 @@ available in EasyScience.
 - [fitting](fitting.md) – Fitting and sampling, including `Fitter`,
   `Sampler` and the available minimizers.
 - [global_object](global_object.md) – Global singleton providing shared
-  services (logger, map, undo/redo stack, script manager).
+  services (logger, object registry, undo/redo stack, script manager).
 - [job](job.md) – Job and experiment abstractions for running and
   organizing analyses.
 - [utils](utils.md) – Miscellaneous utility functions and helpers (class

docs/docs/user-guide/parameter-dependency-serialization.md

@@ -163,8 +163,8 @@ reported the same way, with the underlying error message appended.
   first and call `resolve_all_parameter_dependencies` on the collection
   as a whole.
 - **Keep the referenced objects alive.** Lookup goes through the global
-  object map, so a parameter that has been garbage-collected cannot be
-  found.
+  object registry, so a parameter that has been garbage-collected cannot
+  be found.
 - **Do not load the same data twice in one session.** Serializer ids are
   restored verbatim. If the original parameters, or an earlier load of
   the same file, are still alive, a dependency can be bound to that

src/easyscience/base_classes/model_base.py

@@ -147,7 +147,7 @@ class definition.
                 try:
                     temp_param = getattr(cls_instance, key)
                     setattr(cls_instance, '_' + key, value)
-                    cls_instance._global_object.map.prune(temp_param.unique_name)
+                    cls_instance._global_object.registry.discard(temp_param.unique_name)
                 except Exception as e:
                     raise SyntaxError(f"""Could not set parameter {key} during `from_dict` with full deserialized variable. \n'
                             This should be fixed in the class definition. Error: {e}""") from e

src/easyscience/base_classes/new_base.py

@@ -36,7 +36,7 @@ def __init__(self, unique_name: Optional[str] = None, display_name: Optional[str
         if not isinstance(unique_name, str):
             raise TypeError('Unique name has to be a string.')
         self._unique_name = unique_name
-        self._global_object.map.add_vertex(self, obj_type='created')
+        self._global_object.registry.add(self)
         if display_name is not None and not isinstance(display_name, str):
             raise TypeError('Display name must be a string or None')
         self._display_name = display_name
@@ -51,7 +51,7 @@ def unique_name(self, new_unique_name: str):
         """
         Set a new unique name for the object.
 
-        The old name is still kept in the map.
+        The old name is still kept in the registry.
 
         Parameters
         ----------
@@ -66,7 +66,7 @@ def unique_name(self, new_unique_name: str):
         if not isinstance(new_unique_name, str):
             raise TypeError('Unique name has to be a string.')
         self._unique_name = new_unique_name
-        self._global_object.map.add_vertex(self)
+        self._global_object.registry.add(self)
         self._default_unique_name = False
 
     @property

src/easyscience/global_object/__init__.py

@@ -3,5 +3,5 @@
 
 from .global_object import GlobalObject  # noqa: F401
 from .logger import Logger  # noqa: F401
-from .map import Map  # noqa: F401
+from .object_registry import ObjectRegistry  # noqa: F401
 from .undo_redo import UndoStack  # noqa: F401

src/easyscience/global_object/global_object.py

@@ -3,7 +3,7 @@
 
 from ..utils.classUtils import singleton
 from .logger import Logger
-from .map import Map
+from .object_registry import ObjectRegistry
 
 
 @singleton
@@ -16,7 +16,7 @@ class GlobalObject:
     """
 
     __log = Logger()
-    __map = Map()
+    __registry = ObjectRegistry()
     __stack = None
     __debug = False
 
@@ -27,8 +27,8 @@ def __init__(self):
         self.debug: bool = self.__debug
         # Stack. This is where the undo/redo operations are stored.
         self.stack = self.__stack
-        # Map. This is the conduit database between all global object species
-        self.map: Map = self.__map
+        # Registry. All live EasyScience objects, looked up by unique name
+        self.registry: ObjectRegistry = self.__registry
 
     def instantiate_stack(self):
         """
@@ -56,9 +56,7 @@ def generate_unique_name(self, name_prefix: str) -> str:
         str
             Generated unique name.
         """
-        names_with_prefix = [
-            name for name in self.map.vertices() if name.startswith(name_prefix + '_')
-        ]
+        names_with_prefix = [name for name in self.registry if name.startswith(name_prefix + '_')]
         if names_with_prefix:
             name_with_prefix_count = [0]
             for name in names_with_prefix: