Core for Computational Biomedicine

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1. scDiagnostics scDiagnostics Public

   Diagnostic functions to assess the quality of cell type annotations in single-cell RNA sequencing data

   R 18 2

2. BioPlex BioPlex Public

   R-side access to protein-protein interaction data from Gygi and Harper labs

   R 8 2

3. nhanes-database nhanes-database Public

   Database facilities for performant working with CDC's National Health and Nutrition Examination Survey (NHANES) data

   R 8 5

4. MerfishData MerfishData Public

   Collection of public MERFISH datasets

   R 1 2

5. ai-powered-coding ai-powered-coding Public

   Workshop materials for “AI-Powered Vibe Coding” (CCB, HMS): slides, setup guides, live demo, and hands-on R/Python exercises.

   R 11 3

6. spatial-workshop-python spatial-workshop-python Public

   Repository for spatial omics workshop in Python with the scverse ecosystem.

   Jupyter Notebook 9