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Update nextflow tutorial - #8

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fredjaya wants to merge 4 commits into
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fredjaya wants to merge 4 commits into
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nextflow

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@fredjaya

@fredjaya fredjaya commented Nov 3, 2026 •

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Replace the documentation for running nextflow on bioshell with a worked example of the recorded nfcore/scrnaseq demo. Includes best practices for running nextflow on the bioshell, with a checklist at the end to apply to users' own pipelines.

TODO:

  • Check rendered page
  • Add youtube link when ready

@fredjaya
fredjaya marked this pull request as ready for review November 3, 2026 04:13
@fredjaya
fredjaya marked this pull request as draft November 3, 2026 04:18
@fredjaya fredjaya assigned fredjaya and unassigned fredjaya Nov 3, 2026

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