Pinned Loading

1. bgc_quast_ppl bgc_quast_ppl Public

   Nextflow DSL2 pipeline that predicts biosynthetic gene clusters with antiSMASH, DeepBGC and GECCO, and compares them across samples, tools or a reference genome in one BGC-QUAST report, with option…

   HTML 1

2. coarse-grained_Brownian_dynamics_simulator coarse-grained_Brownian_dynamics_simulator Public

   A coarse-grained Brownian dynamics simulator for protein-like particles in 3D.

   Python

3. parkinson-speech-analysis parkinson-speech-analysis Public

   Acoustic and statistical analysis of speech in Parkinson's disease.

   Python

4. bm_scrna_methods bm_scrna_methods Public

   End-to-end scRNA-seq analysis of human bone marrow (BMMC): clustering and annotation, a dimensionality-reduction benchmark, pathway, trajectory, cell-cell communication and deconvolution.

   Python

5. scATAC_sequencing scATAC_sequencing Public

   scATAC seq (Single Cell- Assay for Transposase-Accessible Chromatin) Analysis

   R

6. spatial_transcriptomics spatial_transcriptomics Public

   Spatial Transcriptomics data analysis on 10x vision mouse brain dataset in R using Seurat packages.

   R