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Add petab1to2(reparametrize=...) #539

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7 changes: 7 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -33,6 +33,9 @@
https://github.com/PEtab-dev/libpetab-python/pull/533,
https://github.com/PEtab-dev/libpetab-python/pull/535, and
https://github.com/PEtab-dev/libpetab-python/pull/536)
* `petab1to2` no longer adds default `uniform` priors to non-estimated
parameters, or if no estimated parameter has an objective prior
(by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/539)
* `petab_math_str` now produces valid PEtab math expressions for boolean
operators, (in)equality, `min`/`max`, powers with negative bases, and
`pi`/`e`, and prints floats without loss of precision. PEtab v2 condition
Expand Down Expand Up @@ -80,6 +83,10 @@
* `petab.v2.reparametrize_log` estimates parameters on log scale by replacing
them with new log-transformed parameters
(by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/560)
* `petab1to2` and `petab_files_1to2` can preserve the objective function of
log-scaled parameters with `parameterScale*` priors via
`reparametrize="priors"` or `reparametrize="all"`
(by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/539)

## 0.9 series

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