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1. ZeroInflatedVCtest ZeroInflatedVCtest Public

   R package: variance-component score tests for zero-inflated count outcomes, generalizing SKAT (Genetic Epidemiology 2019)

   R

2. MS_severity_phewas MS_severity_phewas Public

   Code for the MS severity (MSSS) PheWAS, replication and meta-analysis (Neurol Neuroimmunol Neuroinflamm 2020)

   R 1

3. UKB_PS-PRSxOSA_GxE_study_of_CAD UKB_PS-PRSxOSA_GxE_study_of_CAD Public

   Pathway-specific polygenic risk scores for coronary artery disease: bgen scorer, variant-to-gene and pathway builders, and the UK Biobank OSA × PS-PRS interaction analysis (Circ Genom Precis Med 2022)

   R

4. ATM_OSA_Analysis ATM_OSA_Analysis Public archive

   Companion code for Goodman et al. - Distinguishing Age-specific Patterns in Comorbidities of Obstructive Sleep Apnea Using Real-World Data

5. joplin-mcp joplin-mcp Public

   Forked from alondmnt/joplin-mcp

   MCP server for the Joplin note taking app

   Python

6. md_tools md_tools Public

   Whole-section Markdown editing by heading path: fence-aware, lock-serialized, atomic; built for AI coding agents editing shared state files

   Python